MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays
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- dc.contributor.author Rubin, Alan F.
- dc.contributor.author Dias, Mafalda
- dc.contributor.author Frazer, Jonathan
- dc.contributor.author Fowler, Douglas M.
- dc.date.accessioned 2025-03-25T07:25:06Z
- dc.date.available 2025-03-25T07:25:06Z
- dc.date.issued 2025
- dc.description.abstract Multiplexed assays of variant effect (MAVEs) are a critical tool for researchers and clinicians to understand genetic variants. Here we describe the 2024 update to MaveDB ( https://www.mavedb.org/ ) with four key improvements to the MAVE community's database of record: more available data including over 7 million variant effect measurements, an improved data model supporting assays such as saturation genome editing, new built-in exploration and visualization tools, and powerful APIs for data federation and streamlined submission and access. Together these changes support MaveDB's role as a hub for the analysis and dissemination of MAVEs now and into the future.
- dc.format.mimetype application/pdf
- dc.identifier.citation Rubin AF, Stone J, Bianchi AH, Capodanno BJ, Da EY, Dias M, et al. MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays. Genome Biol. 2025 Jan 21;26(1):13. DOI: 10.1186/s13059-025-03476-y
- dc.identifier.doi http://dx.doi.org/10.1186/s13059-025-03476-y
- dc.identifier.issn 1474-7596
- dc.identifier.uri http://hdl.handle.net/10230/70001
- dc.language.iso eng
- dc.publisher BioMed Central
- dc.relation.ispartof Genome Biol. 2025 Jan 21;26(1):13
- dc.rights © The Author(s) 2025. Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
- dc.rights.accessRights info:eu-repo/semantics/openAccess
- dc.rights.uri http://creativecommons.org/licenses/by/4.0/
- dc.subject.keyword DMS
- dc.subject.keyword Deep mutational scanning
- dc.subject.keyword Functional genomics
- dc.subject.keyword MAVEs
- dc.subject.keyword Multiplexed assays of variant effect
- dc.subject.keyword Variant classification
- dc.title MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays
- dc.type info:eu-repo/semantics/article
- dc.type.version info:eu-repo/semantics/publishedVersion