VisualMethyl: a shiny web application for interactive DNA methylation analysis and visualization

Fernández Rebollo, Irene

VisualMethyl: a shiny web application for interactive DNA methylation analysis and visualization

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Citation

Fernández Rebollo, I. VisualMethyl: a shiny web application for interactive DNA methylation analysis and visualization. 2021. handle: http://hdl.handle.net/10230/48991

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Abstract

The DNA methylation data analysis process requires the use of tools and pipelines that implicate programming skills; for this reason, it is necessary to create applications that provide results in a simple, interactive way that allows the user to visualize and understand the data clearly. VisualMethyl is a shiny web application that provides the analysis and interactive visualizations of DNA methylation arrays (450k and EPIC). This tool performs quality control, exploratory analysis, differential methylation, functional enrichment, and survival analysis. The results obtained are presented in an interactive way through the use of dynamic graphs and tables which can be downloaded.