CRISPR-based genome editing in primary human pancreatic islet cells

dc.contributor.authorBevacqua, Romina J.
dc.contributor.authorDai, Xiaoqing
dc.contributor.authorLam, Jonathan Y.
dc.contributor.authorGu, Xueying
dc.contributor.authorFriedlander, Mollie S. H.
dc.contributor.authorTellez, Krissie
dc.contributor.authorMiguel Escalada, Irene
dc.contributor.authorBonàs-Guarch, Silvia
dc.contributor.authorAtla, Goutham
dc.contributor.authorZhao, Weichen
dc.contributor.authorKim, Seung Hyun
dc.contributor.authorDominguez, Antonia A.
dc.contributor.authorQi, Lei S.
dc.contributor.authorFerrer, Jorge
dc.contributor.authorMacDonald, Patrick E.
dc.contributor.authorKim, Seung K.
dc.date.accessioned2021-07-14T07:01:05Z
dc.date.available2021-07-14T07:01:05Z
dc.date.issued2021
dc.description.abstractGene targeting studies in primary human islets could advance our understanding of mechanisms driving diabetes pathogenesis. Here, we demonstrate successful genome editing in primary human islets using clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9 (Cas9). CRISPR-based targeting efficiently mutated protein-coding exons, resulting in acute loss of islet β-cell regulators, like the transcription factor PDX1 and the KATP channel subunit KIR6.2, accompanied by impaired β-cell regulation and function. CRISPR targeting of non-coding DNA harboring type 2 diabetes (T2D) risk variants revealed changes in ABCC8, SIX2 and SIX3 expression, and impaired β-cell function, thereby linking regulatory elements in these target genes to T2D genetic susceptibility. Advances here establish a paradigm for genetic studies in human islet cells, and reveal regulatory and genetic mechanisms linking non-coding variants to human diabetes risk.
dc.description.sponsorshipWe gratefully acknowledge organ donors and their families, Canadian organ procurement organizations, particularly the Human Organ Procurement and Exchange (HOPE) program and the Trillium Gift of Life Network, and islet procurement through the Alberta Diabetes Institute Islet Core, Integrated Islet Distribution Program (U.S. NIH UC4 DK098085). R.J.B. was supported by a postdoctoral fellowship from JDRF (3-PDF-2018-584-A-N) and is on leave from the Animal Biotechnology Laboratory, Facultad de Agronomía, Universidad de Buenos Aires/INPA CONICET, CABA, Argentina. Work in the CRG and ICL was funded by the Wellcome Trust (WT101033), Medical Research Council (MR/L02036X/1), European Research Council Advanced Grant (789055), Ministerio de Ciencia e Innovación (RTI2018-095666-B-I00) and Marató TV3 #201611. Work in the University of Alberta was supported by a Foundation Grant from the Canadian Institutes of Health Research (CIHR: 148451, MacDonald). Work in the Kim lab was supported by NIH awards (R01 DK107507; R01 DK108817; U01 DK123743 to S.K.K.), and JDRF Northern California Center of Excellence (to S.K.K. and M. Hebrok). Work here was also supported by NIH grant P30 DK116074 (S.K.K.)
dc.format.mimetypeapplication/pdf
dc.identifier.citationBevacqua RJ, Dai X, Lam JY, Gu X, Friedlander MSH, Tellez K et al. CRISPR-based genome editing in primary human pancreatic islet cells. Nat Commun. 2021 Apr 23;12(1):2397. DOI: 10.1038/s41467-021-22651-w
dc.identifier.doihttp://dx.doi.org/10.1038/s41467-021-22651-w
dc.identifier.issn2041-1723
dc.identifier.urihttp://hdl.handle.net/10230/48170
dc.language.isoeng
dc.publisherNature Research
dc.relation.projectIDinfo:eu-repo/grantAgreement/EC/H2020/789055
dc.rights© Romina J. Bevacqua et al 2021. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made
dc.rights.accessRightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subject.otherDiabetis
dc.subject.otherGenètica
dc.subject.otherGenòmica
dc.subject.otherProteïnes
dc.titleCRISPR-based genome editing in primary human pancreatic islet cells
dc.typeinfo:eu-repo/semantics/article
dc.type.versioninfo:eu-repo/semantics/publishedVersion

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