• Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set

  Del Toro, N.; Piñero González, Janet, 1977-; Furlong, Laura I., 1971-; Porras, P.; IMEx Consortium Curators (Nature Research, 2019)

  The current wealth of genomic variation data identified at nucleotide level presents the challenge of understanding by which mechanisms amino acid variation affects cellular processes. These effects may manifest as distinct ...
• Consonance processing in the absence of relevant experience: evidence from nonhuman animals

  Toro Soto, Juan Manuel, 1976-; Crespo Bojorque, Paola, 1985- (The Comparative Cognition Society, 2017)

  Consonance is a major feature in harmonic music that has been related to how pleasant a sound is perceived. Consonant chords are defined by simple frequency ratios between their composing tones, whereas dissonant chords ...
• Spatial gamut mapping among non-inclusive gamuts

  Bertalmío, Marcelo; Vazquez-Corral, Javier (Elsevier, 2018)

  Gamut mapping transforms the color gamut of an image to that of a target device. Two cases are usually considered: gamut reduction (target gamut smaller than source gamut), and gamut extension (target gamut larger than ...
• Germline variation at 8q24 and prostate cancer risk in men of European ancestry

  Matejcic, Marco; Kogevinas, Manolis; Haiman, Christopher A. (Nature Research, 2018)

  Chromosome 8q24 is a susceptibility locus for multiple cancers, including prostate cancer. Here we combine genetic data across the 8q24 susceptibility region from 71,535 prostate cancer cases and 52,935 controls of European ...
• Whole-brain neuronal activity displays crackling noise dynamics

  Ponce-Alvarez, Adrián; Jouary, Adrien; Privat, Martin; Deco, Gustavo; Sumbre, Germán (Elsevier, 2018)

  Previous studies suggest that the brain operates at a critical point in which phases of order and disorder coexist, producing emergent patterned dynamics at all scales and optimizing several brain functions. Here, we ...
• CLL cells cumulate genetic aberrations prior to the first therapy even in outwardly inactive disease phase

  Hernández-Sánchez, María; Kotaskova, Jana; Rodríguez, Ana E.; Radova, Lenka; Tamborero Noguera, David; Abáigar, María; Plevova, Karla; Benito, Rocío; Tom, Nikola; Quijada-Álamo, Miguel; Bikos, Vasileos; Martín, Ana África; Pal, Karol; García de Coca, Alfonso; Doubek, Michael; López Bigas, Núria; Hernández-Rivas, Jesús María; Pospisilova, Sarka (Nature Research, 2019)
• Machine learning of coarse-grained molecular dynamics force fields

  Wang, Jiang; Olsson, Simon; Wehmeyer, Christoph; Pérez, Adrià; Charron, Nicholas E.; De Fabritiis, Gianni; Noé, Frank; Clementi, Cecilia (American Chemical Society (ACS), 2019)

  Atomistic or ab initio molecular dynamics simulations are widely used to predict thermodynamics and kinetics and relate them to molecular structure. A common approach to go beyond the time- and length-scales accessible ...
• An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape

  Pokusaeva, Victoria O.; Usmanova, Dinara R.; Putintseva, Ekaterina V.; Espinar, Lorena; Sarkisyan, Karen S.; Mishin, Alexander S.; Bogatyreva, Natalya S.; Ivankov, Dmitry N.; Akopyan, Arseniy V.; Avvakumov, Sergey Ya; Povolotskaya, Inna, 1986-; Filion, Guillaume; Carey, Lucas; Kondrashov, Fyodor A., 1979- (Public Library of Science (PLoS), 2019)

  Characterizing the fitness landscape, a representation of fitness for a large set of genotypes, is key to understanding how genetic information is interpreted to create functional organisms. Here we determined the ...
• NACTA: construyendo el futuro de la tradición del jingju

  Caro Repetto, Rafael; Serra, Xavier (2016)

  En sus poco más de doscientos años de historia, el jingju, u ópera de Pekín, ha conseguido el título de tesoro nacional (guocui) y como tal ha asumido la turbulenta historia reciente del país. En la puja por situarse como ...
• Melodic transformation processes in the arrangements of Jingju Banshi

  Caro Repetto, Rafael; Serra, Xavier (2016)

  Music in jingju (also known as Peking or Beijing opera) is predefined by tradition. Before the appearance of jingju music composers, actors used to “arrange melodies” (bianqu) for new lyrics according to melodic systems ...
• Automatic chord-scale recognition using harmonic pitch class profiles

  Demirel, Emir; Bozkurt, Baris; Serra, Xavier (Sound & Music Computing Conference, 2019)

  This study focuses on the application of different computational methods to carry out a ”modal harmonic analysis” for Jazz improvisation performances by modeling the concept of chord-scales. The Chord-Scale Theory is a ...
• Breaking the state of the heart: meshless model for cardiac mechanics

  Lluch Alvarez, Èric; De Craene, Mathieu; Bijnens, Bart; Sermesant, Maxime; Noailly, Jérôme; Camara, Oscar; Morales, Hernán G. (Springer, 2019)

  Cardiac modeling has recently emerged as a promising tool to study pathophysiology mechanisms and to predict treatment outcomes for personalized clinical decision support. Nevertheless, achieving convergence under large ...
• Exploring the spontaneous expression of human finger-tapping

  Nistal, Javier; Herrera Boyer, Perfecto; Jordà Puig, Sergi (2017)

  We present a study on the behavior of human finger-tapping and the spontaneous expression of rhythm. For the purposes of this study we construe interpret finger-tapping as the casual and rhythmic hitting of objects for ...
• The House Harmonic Filler: interactive exploration of chord sequences by means of an intuitive representation

  Faraldo Pérez, Ángel; Herrera Boyer, Perfecto (2017)

  In this paper we present an interactive two-dimensional representation of musical chord progressions, integrated into a computer program that generates house music harmonic loops in MIDI format, based on a user’s input. ...
• Air violin: a machine learning approach to fingering gesture recognition

  Dalmazzo, David; Ramírez, Rafael,1966- (ACM Association for Computer Machinery, 2017)

  We train and evaluate two machine learning models for predicting fingering in violin performances using motion and EMG sensors integrated in the Myo device. Our aim is twofold: first, provide a fingering recognition model ...
• A variational approach for the fusion of exposure bracketed pairs

  Bertalmío, Marcelo; Levine, Stacey (Institute of Electrical and Electronics Engineers (IEEE), 2013)

  When taking pictures in a dark scene with artificial lighting, the ambient light is not sufficient for most cameras to obtain both accurate color and detail information. The exposure bracketing feature usually available ...
• Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events

  Julca, Irene; Marcet Houben, Marina; Vargas Gómez, Pablo; Gabaldón Estevan, Juan Antonio, 1973- (BioMed Central, 2018)

  Background: Polyploidization is one of the major evolutionary processes that shape eukaryotic genomes, being particularly common in plants. Polyploids can arise through direct genome doubling within a species (autopolypl ...
• Generalized gradient on vector bundle – application to image denoising

  Batard, Thomas; Bertalmío, Marcelo (Springer, 2013)

  We introduce a gradient operator that generalizes the Eu- clidean and Riemannian gradients. This operator acts on sections of vector bundles and is determined by three geometric data: a Rieman- nian metric on the base ...
• An experimental comparison of audio tempo induction algorithms

  Gouyon, Fabien; Klapuri, Anssi; Dixon, Simon; Alonso, Miguel; Tzanetakis, George; Uhle, Christian; Cano Vila, Pedro (Institute of Electrical and Electronics Engineers (IEEE), 2006)

  We report on the tempo induction contest organized during the International Conference on Music Information Retrieval (ISMIR 2004) held at the University Pompeu Fabra in Barcelona, Spain, in October 2004. The goal of this ...
• Topology of music recommendation networks

  Cano Vila, Pedro; Celma, Óscar; Koppenberger, Markus (AIP Publishing, 2006)

  We introduce the concept of decision cost of a spatial graph, which measures the disorder of a given network taking into account not only the connections between nodes but their position in a two-dimensional map. The ...

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