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dc.contributor.author Andrzejak, Ralph Gregor
dc.contributor.author Mormann, Florian
dc.contributor.author Kreuz, Thomas
dc.date.accessioned 2019-11-22T12:21:47Z
dc.date.available 2019-11-22T12:21:47Z
dc.date.issued 2014
dc.identifier.citation Andrzejak RG, Mormann F, Kreuz T. Detecting determinism from point processes [software]. Repositori Digital de la UPF: Barcelona; 2014. Available from: http://hdl.handle.net/10230/42941
dc.identifier.uri http://hdl.handle.net/10230/42941
dc.description Source code in MATLAB format (.m)
dc.description.abstract In order to understand the source code, you should first read the manuscript (Andrzejak RG, Mormann F, Kreuz T. 2014. Detecting determinism from point processes. Phys. Rev. E. 90, 062906) You will find a Zip-File with all source codes. This includes the function: Andrzejak_PRE_90_062906_MeasureS.m, which calculates the rank-based nonlinear prediction score for spike trains S. To understand how to use it, we recommend to have a look at the function Andrzejak_PRE_90_062906_CALL.m. This allows you to calculate S for the different parameters, systems, and settings as used in Figure 1a-e of our paper. In particular, it calls also the scripts that generate our models, superimposes the spike trains with noise, and so on. Using this script, you should be able to reproduce our Figure 1a-e. The source is only partly commented. If you have problems in understanding how certain parts of the code work, please contact us. We will try to comment the corresponding part of the code and upload a new version. Before publishing the source code, we have simplified it and changed variable names to allow for a better understanding. We are confident that, also with these simplifications, the source code contains no bugs. However, if you encounter problems or bugs, please contact us.
dc.description.sponsorship R.G.A. acknowledges Grant No. FIS-2010-18204 of the Spanish Ministry of Education and Science. R.G.A. and F.M. acknowledge funding from the Volkswagen Foundation.
dc.language.iso eng
dc.relation Publicació relacionada: Andrzejak RG, Mormann F, Kreuz T. Detecting determinism from point processes. Phys Rev E. 2014;90:062906. DOI: 10.1103/PhysRevE.90.062906
dc.relation.isreferencedby http://dx.doi.org/10.1103/PhysRevE.90.062906
dc.rights Licensed under a Creative Commons License (CC-BY) 4.0
dc.rights The source codes, data and results on these sites are free of charge for research and education purposes only. Any commercial or military use is prohibited. All resources are provided without any expressed or implied warranty. In no event the authors of the article or any of their host institutions are liable for any damages arising from the use of the software, data or results.
dc.rights.uri https://creativecommons.org/licenses/by/4.0/
dc.title Detecting determinism from point processes [software]
dc.type info:eu-repo/semantics/other
dc.type Software
dc.subject.keyword Nonlinear time series analysis
dc.subject.keyword Prediction error
dc.subject.keyword Point processes
dc.subject.keyword Neuronal spiking
dc.relation.projectID info:eu-repo/grantAgreement/ES/3PN/FIS-2010-18204
dc.rights.accessRights info:eu-repo/semantics/openAccess


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