Drosophila UNR: a factor involved in the translational regulation of dosage compensation

Abaza, Irina

Drosophila UNR: a factor involved in the translational regulation of dosage compensation

Document Type

Doctoral thesis
Published Version

Author

Abaza, Irina

Director

Gebauer, Fátima

Publication Date

2006-11-03

Pages

158 p.

Citation

Abaza, I. Drosophila UNR: a factor involved in the translational regulation of dosage compensation. Universitat Pompeu Fabra; 2006. handle: http://hdl.handle.net/10803/78125

This citation was generated automatically.

Doctoral program

Programa de doctorat en Biomedicina

Abstract

Dosage compensation is a mechanism that equalizes the expression of X-linked genes in those organisms in which males and females differ in the number of X chromosomes. In Drosophila melanogaster, dosage compensation is achieved by up-regulating the transcription of the single male X chromosome. This effect is mediated by a chromatin remodeling complex known as the Male Specific Lethal (MSL) complex or Dosage Compensation Complex (DCC). In female flies, dosage compensation is inhibited primarily because of the translational repression of the mRNA encoding one of the DCC subunits, MSL-2, by the female-specific RNA binding protein Sex-lethal (SXL). To inhibit translation, SXL binds to poly(U) stretches present in both the 5’ and 3’ UTRs of msl-2 mRNA. Sequences adjacent to those SXL-binding sites in the 3´UTR are also required for translation inhibition and are bound by co-repression. In this thesis work, we have designed an affinity chromatography assay to isolate the putative co-repressor(s), and have identified the protein Upstream of N-ras (UNR). Drosophila UNR (dUNR) is an ubiquitous, conserved protein that contains 5 cold shock domains (CSD) and a glutamine- (Q) rich amino- terminal extension. We show that dUNR is a necessary co-factor for SXL-mediated msl-2 repression. SXL recruits dUNR to the 3’ UTR of msl-2 mRNA, imparting a sex-specific function to this ubiquitous protein. Domain mapping experiments indicate that dUNR interacts with SXL and msl-2 mRNA through CSD1, and that the domains for translation inhibition and SXL interaction can be distinguished. Our data indicate that the Q-rich domain, together with CSDs 1 and 2, plays an important role in translational repression, and suggest that factors in addition to dUNR and SXL are required for repression of msl-2 mRNA. Using a combination of UNR immunoprecipitation and microarray analysis, we have identified the mRNAs that are bound to dUNR in male and female flies. Our results suggest that dUNR is not only a novel regulator of dosage compensation, but also a general post-transcriptional regulator of gene expression.

Keywords

translation, initiation, translational control, 5’UTR binding proteins, 3’ UTR binding proteins, SXL, dosage compensation, msl-2, UNR, poly(A) tail and PABP, microarrays, co-repressors