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  • Kayumi, Sayaka; Pérez Jurado, Luis Alberto; Corbett, Mark A. (Elsevier, 2022)
    Purpose: Germline loss-of-function variants in CTNNB1 cause neurodevelopmental disorder with spastic diplegia and visual defects (NEDSDV; OMIM 615075) and are the most frequent, recurrent monogenic cause of cerebral palsy ...
  • Min, Josine L.; Soriano Tarraga, Carolina; Giralt-Steinhauer, Eva; Ruiz Arenas, Carlos, 1990-; Jiménez Conde, Jordi; Roquer, Jaume; González, Juan Ramón; Bustamante Pineda, Mariona; Sunyer Deu, Jordi; Relton, Caroline (Nature Research, 2021)
    Characterizing genetic influences on DNA methylation (DNAm) provides an opportunity to understand mechanisms underpinning gene regulation and disease. In the present study, we describe results of DNAm quantitative trait ...
  • Piñero González, Janet, 1977-; Rodriguez Fraga, Pablo S.; Valls-Margarit, Jordi; Ronzano, Francesco; Accuosto, Pablo; Lambea Jane, Ricard; Sanz, Ferran; Furlong, Laura I., 1971- (Elsevier, 2023)
    The use of molecular biomarkers to support disease diagnosis, monitor its progression, and guide drug treatment has gained traction in the last decades. While only a dozen biomarkers have been approved for their exploitation ...
  • Aftimos, Philippe; Albanell Mestres, Joan; Piccart, Martine J. (American Association for Cancer Research (AACR), 2021)
    AURORA aims to study the processes of relapse in metastatic breast cancer (MBC) by performing multi-omics profiling on paired primary tumors and early-course metastases. Among 381 patients (primary tumor and metastasis ...
  • Byrne, Alicia B.; Broad Institute Center for Mendelian Genomics; Genomic Autopsy Study Research Network; Scott, Hamish S. (Nature Research, 2023)
    Pregnancy loss and perinatal death are devastating events for families. We assessed 'genomic autopsy' as an adjunct to standard autopsy for 200 families who had experienced fetal or newborn death, providing a definitive ...
  • Peter, Silke; Oberhettinger, Philipp; Schuele, Leonard; Dinkelacker, Ariane; Vogel, Wichard; Dörfel, Daniela; Bezdan, Daniela; Ossowski, Stephan; Marschal, Matthias; Liese, Jan; Willmann, Matthias (BioMed Central, 2017)
    BACKGROUND: Pseudomonas putida is a Gram-negative, non-fermenting bacterium frequently encountered in various environmental niches. P. putida rarely causes disease in humans, though serious infections and outbreaks have ...
  • Alvarez-Larrán, Alberto; Díaz-González, Alvaro; Such, Esperanza; Mora, Elvira; Andrade-Campos, Marcio; García-Hernández, Carmen; Gómez-Casares, Maria-Teresa; García-Gutiérrez, Valentín; Carreño-Tarragona, Gonzalo; Garrote, Marta; Fernández-Ibarrondo, Lierni; Cervera, José; Bellosillo Paricio, Beatriz; Cervantes, Francisco; Hernández-Boluda, Juan Carlos; MPN Spanish Group (GEMFIN) (Nature Research, 2020)
  • Moore, Lee E.; Pfeiffer, Ruth M.; Poscablo, Cristina; Real, Francisco X.; Kogevinas, Manolis; Silverman, Debra T.; García Closas, Reina; Chanock, Stephen J.; Tardón, Adonina; Serra, Consol; Carrato, Alfredo; Dosemeci, Mustafa; García Closas, Montserrat; Esteller, Manel; Fraga, Mario F.; Rothman, Nathaniel; Malats i Riera, Núria (Elsevier, 2008)
    BACKGROUND: DNA hypomethylation has been suggested to cause genomic instability and increase cancer risk. We aimed to test the hypothesis that DNA hypomethylation is associated with increased risk of bladder cancer. METHODS: ...
  • Mixão, Verónica; Gabaldón Estevan, Juan Antonio, 1973- (BioMed Central, 2020)
  • Julca, Irene; Marcet Houben, Marina; Cruz, Fernando; Gómez Garrido, Jèssica; Gaut, Brandon S.; Díez, Concepción M.; Gut, Ivo Glynne; Alioto, Tyler; Vargas Gómez, Pablo; Gabaldón Estevan, Juan Antonio, 1973- (BioMed Central, 2020)
    Background: Olive tree (Olea europaea L. subsp. europaea, Oleaceae) has been the most emblematic perennial crop for Mediterranean countries since its domestication around 6000 years ago in the Levant. Two taxonomic varieties ...
  • Sieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Kabbe, Rolf; Park, Peter J.; Eils, Roland; Schlesner, Matthias; PCAWG Structural Variation Working Group; Brors, Benedikt; Rippe, Karsten; Jones, David T. W.; Feuerbach, Lars; PCAWG Consortium; Ossowski, Stephan; Estivill, Xavier, 1955- (Nature Research, 2020)
    Cancers require telomere maintenance mechanisms for unlimited replicative potential. They achieve this through TERT activation or alternative telomere lengthening associated with ATRX or DAXX loss. Here, as part of the ...
  • Rendón-Anaya, Martha; Montero-Vargas, Josaphat M.; Saburido-Álvarez, Soledad; Vlasova, Anna; Capella Gutiérrez, Salvador Jesús, 1985-; Ordaz-Ortiz, José Juan; Aguilar, O. Mario; Vianello-Brondani, Rosana P.; Santalla, Marta; Delaye, Luis; Gabaldón Estevan, Juan Antonio, 1973-; Gepts, Paul; Winkler, Robert; Guigó Serra, Roderic; Delgado-Salinas, Alfonso; Herrera-Estrella, Alfredo (BioMed Central, 2017)
    Background: Modern civilization depends on only a few plant species for its nourishment. These crops were derived via several thousands of years of human selection that transformed wild ancestors into high-yielding ...
  • Castro e Silva, Marcos Araújo; Nunes, Kelly; Barbosa Lemes, Renan; Mas Sandoval, Àlex, 1989-; Guerra Amorim, Carlos Eduardo; Krieger, José Eduardo; Mill, José Geraldo; Salzano, Francisco Mauro; Bortolini, Maria Cátira; Pereira, Alexandre da Costa; Comas, David, 1969-; Hünemeier, Tábita (National Academy of Sciences, 2020)
    In the 15th century, ∼900,000 Native Americans, mostly Tupí speakers, lived on the Brazilian coast. By the end of the 18th century, the coastal native populations were declared extinct. The Tupí arrived on the east coast ...
  • Gulia-Nuss, Monika; Tornador Antolin, Cristian, 1979-; Hill, Catherine A. (Nature Research, 2016)
    Ticks transmit more pathogens to humans and animals than any other arthropod. We describe the 2.1 Gbp nuclear genome of the tick, Ixodes scapularis (Say), which vectors pathogens that cause Lyme disease, human granulocytic ...
  • Talavera, Adrián; Palmada Flores, Marc; Burriel Carranza, Bernat; Valbuena Ureña, Emilio; Mochales Riaño, Gabriel; Adams, Dean C.; Tejero Cicuéndez, Héctor, 1993-; Soler Membrives, Anna; Amat Orriols, Fèlix; Guinart, Dani; Carbonell Buira, Francesc; Obón Losada, Elena; Marquès i Bonet, Tomàs, 1975-; Carranza Gil-Dolz del Castellar, Salvador (Elsevier, 2023)
    The Montseny brook newt (Calotriton arnoldi), considered the most endangered amphibian in Europe, is a relict salamandrid species endemic to a small massif located in northeastern Spain. Although conservation efforts should ...
  • Lazaridis, Iosif; Comas, David, 1969-; Reich, David (Nature Publishing Group, 2016)
    We report genome-wide ancient DNA from 44 ancient Near Easterners ranging in time between ~12,000 and 1,400 bc, from Natufian hunter-gatherers to Bronze Age farmers. We show that the earliest populations of the Near East ...
  • Vilà-Valls, Laura; Aizpurua-Iraola, Julen; Casinge, Sebastian; Bojs, Karin; Flores-Bello, André; Font-Porterias, Neus; Comas, David, 1969- (Oxford University Press, 2023)
    The Resande are a minority ethnic group in Sweden, who were characterized by an itinerant way of life, and they have been suggested to originate from the mixture between Swedish and Romani populations. Because the population ...
  • Dobrynin, Pavel; Liu, Shiping; Tamazian, Gaik; Xiong, Zijun; Yurchenko, Andrey A.; Krasheninnikova, Ksenia; Kliver, Sergey; Schmidt-Küntzel, Anne; Koepfli, Klaus-Peter; Johnson, Warren; Kuderna, Lukas, 1989-; García Pérez, Raquel, 1989-; de Manuel, Marc; Godinez, Ricardo; Komissarov, Aleksey; Makunin, Alexey; Brukhin, Vladimir; Qiu, Weilin; Zhou, Long; Li, Fang; Yi, Jian; Driscoll, Carlos; Antunes, Agostinho; Oleksyk, Taras K.; Eizirik, Eduardo; Perelman, Polina; Roelke, Melody; Wildt, David; Diekhans, Mark; Marquès i Bonet, Tomàs, 1975-; Marker, Laurie; Bhak, Jong; Wang, Jun; Zhang, Guojie; O'Brien, Stephen J. (BioMed Central, 2015)
    BACKGROUND: Patterns of genetic and genomic variance are informative in inferring population history for human, model species and endangered populations. RESULTS: Here the genome sequence of wild-born African cheetahs ...
  • Dobrynin, Pavel; Kuderna, Lukas, 1989-; García Pérez, Raquel, 1989-; de Manuel, Marc; Marquès i Bonet, Tomàs, 1975-; O’Brien, Stephen J. (BioMed Central, 2015)
    BACKGROUND: Patterns of genetic and genomic variance are informative in inferring population history for human, model species and endangered populations. RESULTS: Here the genome sequence of wild-born African cheetahs ...
  • Bellmunt Molins, Joaquim, 1959-; Perera Bel, Júlia; Orsola, Anna; Rodriguez-Vida, Alejo; Juanpere, Nuria; Lloreta Trull, Josep, 1958-; Hernández, Silvia; Kwiatkowski, David J. (American Association for Cancer Research (AACR), 2020)
    High-grade T1 (HGT1) bladder cancer is the highest risk subtype of non-muscle-invasive bladder cancer with unpredictable outcome and poorly understood risk factors. Here, we examined the association of somatic mutation ...

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