Browsing by Author "Steijger, Tamara"

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  • Steijger, Tamara; Guigó Serra, Roderic; RGASP Consortium (Nature Publishing Group, 2013)
    We evaluated 25 protocol variants of 14 independent computational methods for exon identification, transcript reconstruction and expression-level quantification from RNA-seq data. Our results show that most algorithms are ...
  • Engström, Pär G.; Steijger, Tamara; Sipos, Botond; Grant, Gregory R.; Kahles, André; RGASP Consortium; Rätsch, Gunnar; Goldman, Nick; Hubbard, Tim J.; Harrow, Jennifer; Guigó Serra, Roderic; Bertone, Paul (Nature Publishing Group, 2013)
    High-throughput RNA sequencing is an increasingly accessible method for studying gene structure and activity on a genome-wide scale. A critical step in RNA-seq data analysis is the alignment of partial transcript reads to ...