Browsing by Author "Planas Iglesias, Joan, 1980-"

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  • Bonet Martínez, Jaume, 1982-; Planas Iglesias, Joan, 1980-; García-García, Javier, 1982-; Marín López, Manuel Alejandro, 1987-; Fernández Fuentes, Narcís; Oliva Miguel, Baldomero (Oxford University Press, 2014)
    The function of a protein is determined by its three-dimensional structure, which is formed by regular (i.e. β-strands and α-helices) and non-periodic structural units such as loops. Compared to regular structural elements, ...
  • García-García, Javier, 1982-; Güney, Emre, 1983-; Aragüés Peleato, Ramón; Planas Iglesias, Joan, 1980-; Oliva Miguel, Baldomero (BioMed Central, 2010)
    Background: The analysis and usage of biological data is hindered by the spread of information across multiple repositories and the difficulties posed by different nomenclature systems and storage formats. In particular, ...
  • Boada Centeno, Núria; Planas Iglesias, Joan, 1980-; Oliva Miguel, Baldomero (BioMed Central, 2005)
    Comparative modeling is becoming an increasingly helpful technique in microbial cell factories as the knowledge of the three-dimensional structure of a protein would be an invaluable aid to solve problems on protein ...
  • Sieberts, Solveig K.; García-García, Javier, 1982-; Aguilar, Daniel; Anton, Bernat; Bonet Martínez, Jaume, 1982-; Fornés Crespo, Oriol, 1983-; Marín López, Manuel Alejandro, 1987-; Planas Iglesias, Joan, 1980-; Poglayen, Daniel, 1984-; Oliva Miguel, Baldomero; Mangravite, Lara M. (Nature Publishing Group, 2016)
    Rheumatoid arthritis (RA) affects millions world-wide. While anti-TNF treatment is widelyused to reduce disease progression, treatment fails inBone-third of patients. No biomarkercurrently exists that identifies non-responders ...
  • Hill, Steven M.; Anton, Bernat; Bonet Martínez, Jaume, 1982-; García-García, Javier, 1982-; Oliva Miguel, Baldomero; Planas Iglesias, Joan, 1980-; Poglayen, Daniel, 1984-; Mukherjee, Sach; The HPN-DREAM Consortium (Nature Publishing Group, 2016)
    It remains unclear whether causal, rather than merely correlational, relationships in molecular networks can be inferred in complex biological settings. Here we describe the HPN-DREAM network inference challenge, which ...
  • Marín López, Manuel Alejandro, 1987-; Planas Iglesias, Joan, 1980-; Aguirre Plans, Joaquim, 1993-; Bonet Martínez, Jaume, 1982-; García-García, Javier, 1982-; Fernández Fuentes, Narcís; Oliva Miguel, Baldomero (Oxford University Press, 2018)
    MOTIVATION: The characterization of the protein-protein association mechanisms is crucial to understanding how biological processes occur. It has been previously shown that the early formation of non-specific encounters ...
  • Gohl, Patrick; Bonet Martínez, Jaume, 1982-; Fornés Crespo, Oriol, 1983-; Planas Iglesias, Joan, 1980-; Fernández Fuentes, Narcís; Oliva Miguel, Baldomero (Oxford University Press, 2023)
    Summary: The SBILib Python library provides an integrated platform for the analysis of macromolecular structures and interactions. It combines simple 3D file parsing and workup methods with more advanced analytical tools. ...

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