Browsing by Author "Mallo, Mar"

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  • A comparison of RNA-Seq results from paired formalin-fixed paraffin-embedded and fresh-frozen glioblastoma tissue samples
    Esteve-Codina, Anna; Arpí Llucià, Oriol; Martínez-García, Maria; Pineda, Estela; Mallo, Mar; Gut, Marta; Carrato, Cristina; Rovira Guerín, Ana; Lopez, Raquel; Tortosa, Avelina; Dabad, Marc; del Barco, Sonia; Heath, Simon; Bagué, Silvia; Ribalta, Teresa; Alameda Quitllet, Francisco; de la Iglesia, Nuria; Balaña, Carmen; GLIOCAT Group (Public Library of Science (PLoS), 2017)
    The molecular classification of glioblastoma (GBM) based on gene expression might better explain outcome and response to treatment than clinical factors. Whole transcriptome sequencing using next-generation sequencing ...
  • A framework for the clinical implementation of optical genome mapping in hematologic malignancies
    Levy, Brinn; Kanagal-Shamanna, Rashmi; Sahajpal, Nikhil S.; Neveling, Kornelia; Rack, Katrina; Dewaele, Barbara; Olde Weghuis, Daniel; Stevens-Kroef, Marian; Puiggros Metje, Anna Maria; Mallo, Mar; Clifford, Benjamin; Mantere, Tuomo; Hoischen, Alexander; Espinet Solà, Blanca; Kolhe, Ravindra; Solé, Francesc; Raca, Gordana; Smith, Adam C. (Wiley, 2024)
    Optical Genome Mapping (OGM) is rapidly emerging as an exciting cytogenomic technology both for research and clinical purposes. In the last 2 years alone, multiple studies have demonstrated that OGM not only matches the ...
  • In silico validation of RNA-Seq results can identify gene fusions with oncogenic potential in glioblastoma
    Hernandez, Ainhoa; Muñoz-Mármol, Ana M.; Esteve-Codina, Anna; Alameda Quitllet, Francisco; Carrato, Cristina; Pineda, Estela; Arpí Llucià, Oriol; Martinez-García, Maria; Mallo, Mar; Gut, Marta; Barco Berrón, Sonia del; Gallego, Oscar; Dabad, Marc; Mesia, Carlos; Bellosillo Paricio, Beatriz; Domenech, Marta; Vidal, Noemí; Aldecoa, Iban; Iglesia, Nuria de la; Balana, Carmen (Nature Research, 2022)
    RNA-Sequencing (RNA-Seq) can identify gene fusions in tumors, but not all these fusions have functional consequences. Using multiple data bases, we have performed an in silico analysis of fusions detected by RNA-Seq in ...
  • Pathophysiologic and clinical implications of molecular profiles resultant from deletion 5q
    Ademá, Veraor; Palomo, Laura; Walter, Wencke; Mallo, Mar; Hutter, Stephan; La Framboise, Thomas; Arenillas Rocha, Leonor; Meggendorfer, Manja; Radivoyevitch, Tomas; Xicoy, Blanca; Pellagatti, Andrea; Haferlach, Claudia; Boultwood, Jacqueline; Kern, Wolfgang; Visconte, Valeria; Sekeres, Mikkael; Barnard, John; Haferlach, Torsten; Solé Ristol, Francesc; Maciejewski, Jaroslaw P. (Elsevier, 2022)
    Background: haploinsufficiency (HI) resulting from deletion of the long arm of chromosome 5 [del(5q)] and the accompanied loss of heterozygosity are likely key pathogenic factors in del(5q) myeloid neoplasia (MN) although ...
  • Regions of homozygosity confer a worse prognostic impact in myelodysplastic syndrome with normal karyotype
    Mallo, Mar; Arenillas Rocha, Leonor; Solé, Francesc (Wiley, 2023)
    Half of the myelodysplastic syndromes (MDS) have normal karyotype by conventional banding analysis. The percentage of true normal karyotype cases can be reduced by 20-30% with the complementary application of genomic ...
  • The C250T mutation of TERTp might grant a better prognosis to glioblastoma by exerting less biological effect on telomeres and chromosomes than the C228T mutation
    Gorria, Teresa; Crous-Bou, Marta; Pineda, Estela; Hernandez, Ainhoa; Domenech, Marta; Sanz, Carolina; Jares, Pedro; Muñoz Mármol, Ana María; Arpí Llucià, Oriol; Meléndez, Bárbara; Gut, Marta; Esteve, Anna; Esteve-Codina, Anna; Parra Farré, Genís; Alameda Quitllet, Francisco; Carrato, Cristina; Aldecoa, Iban; Mallo, Mar; Iglesia, Nuria de la; Balana, Carmen (MDPI, 2024)
    The aim of this study was to determine how TERTp mutations impact glioblastoma prognosis. Materials and methods: TERTp mutations were assessed in a retrospective cohort of 258 uniformly treated glioblastoma patients. ...

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