Browsing by Author "Lizano González, Esther, 1974-"

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  • A new assemblage of late Neanderthal remains from Cova Simanya (NE Iberia)
    Morales, Juan I.; Cebrià, Artur; Soto, María; Rodríguez-Hidalgo, Antonio; Hernando, Raquel; Moreno-Ribas, Elena; Lombao, Diego; Rabuñal, José R.; Martín-Perea, David M.; García-Tabernero, Antonio; Allué, Ethel; García Basanta, Andrea; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975-; Talamo, Sahra; Tassoni, Laura; Lalueza Fox, Carles, 1965-; Fullola, Josep M.; Rosas, Antonio (Frontiers, 2023)
    This study presents an exceptional collection of 54 Late Pleistocene human remains that correspond to at least three Neanderthal individuals from Simanya Gran, the main gallery of Cova Simanya, located in the northeastern ...
  • Comprehensive identification of somatic nucleotide variants in human brain tissue
    Wang, Yifan; Lobon Garcia, Irene; Juan, David; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975-; Abyzov, Alexej (BioMed Central, 2021)
    Background: Post-zygotic mutations incurred during DNA replication, DNA repair, and other cellular processes lead to somatic mosaicism. Somatic mosaicism is an established cause of various diseases, including cancers. ...
  • Differential DNA methylation of vocal and facial anatomy genes in modern humans
    Gokhman, David; García Pérez, Raquel, 1989-; Lizano González, Esther, 1974-; Ferrando-Bernal, Manuel, 1990-; Gelabert Xirinachs, Pere, 1991-; Lalueza Fox, Carles, 1965-; Marquès i Bonet, Tomàs, 1975-; Carmel, Liran (Nature Research, 2020)
    Changes in potential regulatory elements are thought to be key drivers of phenotypic divergence. However, identifying changes to regulatory elements that underlie human-specific traits has proven very challenging. Here, ...
  • Evidence for the biogenesis of more than 1,000 novel human microRNAs
    Friedländer, Marc R.; Lizano González, Esther, 1974-; Houben, Anna J.; Bezdan, Daniela; Bañez Coronel, Mónica; Kudla, Grzegorz; Mateu Huertas, Elisabet, 1983-; Kagerbauer, Birgit; González Morilla, Justo; Chen, Kevin C; LeProust, Emily M; Martí Puig, Eulàlia; Estivill, Xavier, 1955- (BioMed Central, 2014)
    Background: MicroRNAs (miRNAs) are established regulators of development, cell identity and disease. Although nearly two thousand human miRNA genes are known and new ones are continuously discovered, no attempt has been ...
  • Flow sorting enrichment and nanopore sequencing of chromosome 1 from a Chinese individual
    Kuderna, Lukas, 1989-; Solís Moruno, Manuel, 1993-; Batlle Masó, Laura, 1993-; Julià, Eva; Lizano González, Esther, 1974-; Anglada Busquets, Roger; Ramírez Bautista, Eva; Bote, Alex; Tormo, Marc; Marquès i Bonet, Tomàs, 1975-; Fornas Carreño, Oscar; Casals López, Ferran (Frontiers Media, 2020)
    Sorting of individual chromosomes by Flow Cytometry (flow-sorting) is an enrichment method to potentially simplify genome assembly by isolating chromosomes from the context of the genome. We have recently developed a ...
  • Genetic data from the extinct giant rat from Tenerife (Canary Islands) points to a recent divergence from mainland relatives
    Renom, Pere; Dios Martínez, Toni de, 1994-; Civit, Sergi; Llovera Nadal, Laia; Sánchez-Gracia, Alejandro; Lizano González, Esther, 1974-; Rando, Juan Carlos; Marquès i Bonet, Tomàs, 1975-; Kergoat, Gael J.; Casanovas-Vilar, Isaac; Lalueza Fox, Carles, 1965- (Royal Society, 2021)
    Evolution of vertebrate endemics in oceanic islands follows a predictable pattern, known as the island rule, according to which gigantism arises in originally small-sized species and dwarfism in large ones. Species of ...
  • Genomic analysis of 18th-century Kazakh individuals and their oral microbiome
    White, Anna E.; Dios Martínez, Toni de, 1994-; Carrión, Pablo; Bonora, Gian Luca; Llovera Nadal, Laia; Cilli, Elisabetta; Lizano González, Esther, 1974-; Khabdulina, Maral K.; Tleugabulov, Daniyar T.; Olalde Marquínez, Íñigo, 1987-; Marquès i Bonet, Tomàs, 1975-; Balloux, François; Pettener, Davide; van Dorp, Lucy; Luiselli, Donata; Lalueza Fox, Carles, 1965- (MDPI, 2021)
    The Asian Central Steppe, consisting of current-day Kazakhstan and Russia, has acted as a highway for major migrations throughout history. Therefore, describing the genetic composition of past populations in Central Asia ...
  • Insights from the rescue and breeding management of Cuvier’s gazelle (Gazella cuvieri) through whole-genome sequencing
    Alvarez-Estape, Marina; Fontseré Alemany, Clàudia, 1992-; Serres Armero, Aitor, 1992-; Kuderna, Lukas, 1989-; Dobrynin, Pavel; Guidara, Héla; Pukazhenthi, Budhan S.; Koepfli, Klaus-Peter; Marquès i Bonet, Tomàs, 1975-; Moreno, Eulalia; Lizano González, Esther, 1974- (Wiley, 2022)
    Captive breeding programmes represent the most intensive type of ex situ population management for threatened species. One example is the Cuvier’s gazelle programme that started in 1975 with only four founding individuals, ...
  • Maximizing the acquisition of unique reads in noninvasive capture sequencing experiments
    Fontseré Alemany, Clàudia, 1992-; Alvarez-Estape, Marina; Kuhlwilm, Martin; Marquès i Bonet, Tomàs, 1975-; Lizano González, Esther, 1974- (Wiley, 2021)
    Noninvasive samples as a source of DNA are gaining interest in genomic studies of endangered species. However, their complex nature and low endogenous DNA content hamper the recovery of good quality data. Target capture ...
  • Metagenomic analysis of a blood stain from the French revolutionary Jean-Paul Marat (1743-1793)
    de Dios, Toni; van Dorp, Lucy; Charlier, Philippe; Morfopoulou, Sofia; Lizano González, Esther, 1974-; Bon, Celine; Le Bitouzé, Corinne; Alvarez-Estape, Marina; Marquès i Bonet, Tomàs, 1975-; Balloux, François; Lalueza Fox, Carles, 1965- (Elsevier, 2020)
    The French revolutionary Jean-Paul Marat (1743-1793) was assassinated in 1793 in his bathtub, where he was trying to find relief from the debilitating skin disease he was suffering from. At the time of his death, Marat was ...
  • Past connectivity but recent inbreeding in cross river gorillas determined using whole genomes from single hairs
    Alvarez-Estape, Marina; Pawar, Harvinder; Fontseré Alemany, Clàudia, 1992-; Trujillo, Amber E.; Gunson, Jessica L.; Bergl, Richard A.; Bermejo, Magdalena; Linder, Joshua M.; McFarland, Kelley; Oates, John F.; Sunderland-Groves, Jacqueline L.; Orkin, Joseph D.; Higham, James P.; Viaud-Martinez, Karine A.; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975- (MDPI, 2023)
    The critically endangered western gorillas (Gorilla gorilla) are divided into two subspecies: the western lowland (G. g. gorilla) and the Cross River (G. g. diehli) gorilla. Given the difficulty in sampling wild great ape ...
  • Recovering the genomes hidden in museum wet collections
    Ruiz-Gartzia, Irune; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975-; Kelley, Joanna L. (Wiley, 2022)
    Natural history museums hold vast collections of biomaterials. The collections in museums, often painstakingly sampled, are largely unexplored treasures that may help us better understand biodiversity on the planet. Museum ...
  • Salmonella enterica from a soldier from the 1652 siege of Barcelona (Spain) supports historical transatlantic epidemic contacts
    Dios Martínez, Toni de, 1994-; Carrión, Pablo; Olalde Marquínez, Íñigo, 1987-; Llovera Nadal, Laia; Lizano González, Esther, 1974-; Pàmies, Dídac; Marquès i Bonet, Tomàs, 1975-; Balloux, François; van Dorp, Lucy; Lalueza Fox, Carles, 1965- (Elsevier, 2021)
    Ancient pathogen genomics is an emerging field allowing reconstruction of past epidemics. The demise of post-contact American populations may, at least in part, have been caused by paratyphoid fever brought by Europeans. ...
  • Selective single molecule sequencing and assembly of a human Y chromosome of African origin
    Kuderna, Lukas, 1989-; Lizano González, Esther, 1974-; Julià, Eva; Gómez Garrido, Jèssica; Serres Armero, Aitor, 1992-; Kuhlwilm, Martin; Alandes, Regina Antoni; Alvarez-Estape, Marina; Juan, David; Simon, Heath; Alioto, Tyler; Gut, Marta; Gut, Ivo Glynne; Schierup, Mikkel H.; Fornas Carreño, Oscar; Marquès i Bonet, Tomàs, 1975- (Nature Research, 2019)
    Mammalian Y chromosomes are often neglected from genomic analysis. Due to their inherent assembly difficulties, high repeat content, and large ampliconic regions, only a handful of species have their Y chromosome properly ...
  • The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS
    Orkin, Joseph D.; Manuel Montero, Marc de, 1991-; Campo, Javier del; Fontseré Alemany, Clàudia, 1992-; Kuderna, Lukas, 1989-; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975-; Melin, Amanda D. (National Academy of Sciences, 2021)
    Ecological flexibility, extended lifespans, and large brains have long intrigued evolutionary biologists, and comparative genomics offers an efficient and effective tool for generating new insights into the evolution of ...
  • Transcriptome innovations in primates revealed by single-molecule long-read sequencing
    Ferrández Peral, Luis, 1991-; Zhan, Xiaoyu; Zhan, Xiaoyu; Alvarez-Estape, Marina; Chiva, Cristina; Esteller Cucala, Paula; García Pérez, Raquel, 1989-; Julià, Eva; Lizano González, Esther, 1974-; Fornas Carreño, Oscar; Sabidó Aguadé, Eduard, 1981-; Li, Qiye; Marquès i Bonet, Tomàs, 1975-; Juan, David; Zhang, Guojie (Cold Spring Harbor Laboratory Press (CSHL Press), 2022)
    Transcriptomic diversity greatly contributes to the fundamentals of disease, lineage-specific biology, and environmental adaptation. However, much of the actual isoform repertoire contributing to shaping primate evolution ...
  • Variation in predicted COVID-19 risk among lemurs and lorises
    Melin, Amanda D.; Orkin, Joseph D.; Valenzuela, Alejandro; Gut, Ivo Glynne; Gut, Marta; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975-; Navarro i Cuartiellas, Arcadi, 1969-; Juan, David; Higham, James P. (Wiley, 2021)
    The novel coronavirus SARS-CoV-2, which in humans leads to the disease COVID-19, has caused global disruption and more than 2 million fatalities since it first emerged in late 2019. As we write, infection rates are at their ...
  • Y chromosome sequence and epigenomic reconstruction across human populations
    Esteller Cucala, Paula; Palmada Flores, Marc; Kuderna, Lukas, 1989-; Fontseré Alemany, Clàudia, 1992-; Serres Armero, Aitor, 1992-; Dabad, Marc; Torralvo, María; Faella, Armida; Ferrández Peral, Luis, 1991-; Llovera Nadal, Laia; Fornas Carreño, Oscar; Julià, Eva; Ramírez, Erika; González, Irene; Hecht, Jochen; Lizano González, Esther, 1974-; Juan, David; Marquès i Bonet, Tomàs, 1975- (Nature Research, 2023)
    Recent advances in long-read sequencing technologies have allowed the generation and curation of more complete genome assemblies, enabling the analysis of traditionally neglected chromosomes, such as the human Y chromosome ...
  • Y-chromosome target enrichment reveals rapid expansion of haplogroup R1b-DF27 in Iberia during the Bronze Age transition
    García-Fernández, Carla; Lizano González, Esther, 1974-; Telford, Marco, 1984-; Olalde Marquínez, Íñigo, 1987-; Cid Ibeas, Rafael de; Larmuseau, Maarten H. D.; Pancorbo, Marian M. de; Calafell i Majó, Francesc (Nature Research, 2022)
    The Y chromosome can yield a unique perspective into the study of human demographic history. However, due to the repetitive nature of part of its sequence, only a small set of regions are suitable for variant calling and ...

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