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Browsing by Author "Fontseré Alemany, Clàudia, 1992-"

Browsing by Author "Fontseré Alemany, Clàudia, 1992-"

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  • Genomics reveals introgression and purging of deleterious mutations in the Arabian leopard (Panthera pardus nimr)
    Mochales Riaño, Gabriel; Fontseré Alemany, Clàudia, 1992-; Manuel Montero, Marc de, 1991-; Talavera, Adrián; Burriel Carranza, Bernat; Tejero Cicuéndez, Héctor, 1993-; AlGethami, Raed Hamoud M.; Shobrak, Mohammed; Marquès i Bonet, Tomàs, 1975-; Carranza Gil-Dolz del Castellar, Salvador (Elsevier, 2023)
    In endangered species, low-genetic variation and inbreeding result from recent population declines. Genetic screenings in endangered populations help to assess their vulnerability to extinction and to create informed ...
  • Historic sampling of a vanishing beast: Population structure and diversity in the black rhinoceros
    Sánchez-Barreiro, Fátima; Cahsan, Binia de; Westbury, Michael V.; Sun, Xin; Margaryan, Ashot; Fontseré Alemany, Clàudia, 1992-; Bruford, Michael W.; Russo, Isa-Rita M.; Kalthoff, Daniela C.; Sicheritz-Ponten, Thomas; Petersen, Bent; Dalén, Love; Zhang, Guojie; Marquès i Bonet, Tomàs, 1975-; Gilbert, M Thomas; Moodley, Yoshan (Oxford University Press, 2023)
    The black rhinoceros (Diceros bicornis L.) is a critically endangered species historically distributed across sub-Saharan Africa. Hunting and habitat disturbance have diminished both its numbers and distribution since the ...
  • HuConTest: testing human contamination in great ape samples
    Kuhlwilm, Martin; Fontseré Alemany, Clàudia, 1992-; Han, Sojung; Alvarez-Estape, Marina; Marquès i Bonet, Tomàs, 1975- (Oxford University Press, 2021)
    Modern human contamination is a common problem in ancient DNA studies. We provide evidence that this issue is also present in studies in great apes, which are our closest living relatives, for example in noninvasive samples. ...
  • Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates
    Yee, Sook Wah; Ferrández Peral, Luis, 1991-; Alentorn Moron, Pol; Fontseré Alemany, Clàudia, 1992-; Marquès i Bonet, Tomàs, 1975-; Giacomini, Kathleen M. (Nature Research, 2024)
    SLC22A10 is an orphan transporter with unknown substrates and function. The goal of this study is to elucidate its substrate specificity and functional characteristics. In contrast to orthologs from great apes, human ...
  • Insights from the rescue and breeding management of Cuvier’s gazelle (Gazella cuvieri) through whole-genome sequencing
    Alvarez-Estape, Marina; Fontseré Alemany, Clàudia, 1992-; Serres Armero, Aitor, 1992-; Kuderna, Lukas, 1989-; Dobrynin, Pavel; Guidara, Héla; Pukazhenthi, Budhan S.; Koepfli, Klaus-Peter; Marquès i Bonet, Tomàs, 1975-; Moreno, Eulalia; Lizano González, Esther, 1974- (Wiley, 2022)
    Captive breeding programmes represent the most intensive type of ex situ population management for threatened species. One example is the Cuvier’s gazelle programme that started in 1975 with only four founding individuals, ...
  • Maximizing the acquisition of unique reads in noninvasive capture sequencing experiments
    Fontseré Alemany, Clàudia, 1992-; Alvarez-Estape, Marina; Kuhlwilm, Martin; Marquès i Bonet, Tomàs, 1975-; Lizano González, Esther, 1974- (Wiley, 2021)
    Noninvasive samples as a source of DNA are gaining interest in genomic studies of endangered species. However, their complex nature and low endogenous DNA content hamper the recovery of good quality data. Target capture ...
  • Past connectivity but recent inbreeding in cross river gorillas determined using whole genomes from single hairs
    Alvarez-Estape, Marina; Pawar, Harvinder; Fontseré Alemany, Clàudia, 1992-; Trujillo, Amber E.; Gunson, Jessica L.; Bergl, Richard A.; Bermejo, Magdalena; Linder, Joshua M.; McFarland, Kelley; Oates, John F.; Sunderland-Groves, Jacqueline L.; Orkin, Joseph D.; Higham, James P.; Viaud-Martinez, Karine A.; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975- (MDPI, 2023)
    The critically endangered western gorillas (Gorilla gorilla) are divided into two subspecies: the western lowland (G. g. gorilla) and the Cross River (G. g. diehli) gorilla. Given the difficulty in sampling wild great ape ...
  • Population dynamics and genetic connectivity in recent chimpanzee history
    Fontseré Alemany, Clàudia, 1992-; Kuhlwilm, Martin; Morcillo Suárez, Carlos, 1969-; Alvarez-Estape, Marina; Hecht, Jochen; Marquès i Bonet, Tomàs, 1975- (Elsevier, 2022)
    Knowledge on the population history of endangered species is critical for conservation, but whole-genome data on chimpanzees (Pan troglodytes) is geographically sparse. Here, we produced the first non-invasive geolocalized ...
  • Potential damaging mutation in LRP5 from genome sequencing of the first reported chimpanzee with the Chiari malformation
    Solís Moruno, Manuel, 1993-; de Manuel, Marc; Hernández Rodríguez, Jéssica, 1983-; Fontseré Alemany, Clàudia, 1992-; Gomara Castaño, Alba; Valsera-Naranjo, Cristina; Crailsheim, Dietmar; Navarro i Cuartiellas, Arcadi, 1969-; Llorente, Miquel; Riera, Laura; Feliu Olleta, Olga; Marquès i Bonet, Tomàs, 1975- (Nature Publishing Group, 2017)
    The genus Pan is the closest related to humans (Homo sapiens) and it includes two species: Pan troglodytes (chimpanzees) and Pan paniscus (bonobos). Different characteristics, some of biomedical aspect, separate them from ...
  • The genetic impact of an Ebola outbreak on a wild gorilla population
    Fontseré Alemany, Clàudia, 1992-; Frandsen, Peter; Hernández Rodríguez, Jéssica, 1983-; Niemann, Jonas; Scharff-Olsen, Camilla Hjorth; Vallet, Dominique; Le Gouar, Pascaline; Ménard, Nelly; Navarro i Cuartiellas, Arcadi, 1969-; Siegismund, Hans R.; Hvilsom, Christina; Gilbert, M Thomas; Kuhlwilm, Martin; Hughes, David; Marquès i Bonet, Tomàs, 1975- (BioMed Central, 2021)
    Background: Numerous Ebola virus outbreaks have occurred in Equatorial Africa over the past decades. Besides human fatalities, gorillas and chimpanzees have also succumbed to the fatal virus. The 2004 outbreak at the ...
  • The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS
    Orkin, Joseph D.; Manuel Montero, Marc de, 1991-; Campo, Javier del; Fontseré Alemany, Clàudia, 1992-; Kuderna, Lukas, 1989-; Lizano González, Esther, 1974-; Marquès i Bonet, Tomàs, 1975-; Melin, Amanda D. (National Academy of Sciences, 2021)
    Ecological flexibility, extended lifespans, and large brains have long intrigued evolutionary biologists, and comparative genomics offers an efficient and effective tool for generating new insights into the evolution of ...
  • Y chromosome sequence and epigenomic reconstruction across human populations
    Esteller Cucala, Paula; Palmada Flores, Marc; Kuderna, Lukas, 1989-; Fontseré Alemany, Clàudia, 1992-; Serres Armero, Aitor, 1992-; Dabad, Marc; Torralvo, María; Faella, Armida; Ferrández Peral, Luis, 1991-; Llovera Nadal, Laia; Fornas Carreño, Oscar; Julià, Eva; Ramírez, Erika; González, Irene; Hecht, Jochen; Lizano González, Esther, 1974-; Juan, David; Marquès i Bonet, Tomàs, 1975- (Nature Research, 2023)
    Recent advances in long-read sequencing technologies have allowed the generation and curation of more complete genome assemblies, enabling the analysis of traditionally neglected chromosomes, such as the human Y chromosome ...

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