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Visualitza Documents OpenAIRE (Open Access Infrastructure for Research in Europe) per autoria "Livi, Carmen Maria"

Ara mostrant els elements 1-5 de 5

catRAPID signature: identification of ribonucleoproteins and RNA-binding regions

Livi, Carmen Maria; Klus, Petr, 1985-; Delli Ponti, Riccardo, 1987-; Tartaglia, Gian Gaetano (Oxford University Press, 2016)

MOTIVATION: Recent technological advances revealed that an unexpected large number of proteins interact with transcripts even if the RNA-binding domains are not annotated. We introduce catRAPID signature to identify ...
ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli

Agostini, Federico, 1985-; Cirillo, Davide; Livi, Carmen Maria; Ponti, Riccardo delli; Tartaglia, Gian Gaetano (Oxford University Press, 2014)

SUMMARY: Here we introduce ccSOL omics, a webserver for large-scale calculations of protein solubility. Our method allows (i) proteome-wide predictions; (ii) identification of soluble fragments within each sequences; (iii) ...
Discovering the 3' UTR-mediated regulation of alpha-synuclein

Marchese, Domenica, 1986-; Botta Orfila, Teresa; Cirillo, Davide; Rodríguez, Juan Antonio; Livi, Carmen Maria; Fernández-Santiago, Ruben; Ezquerra, Mario; Martí, Maria José; Bechara, Elias; Tartaglia, Gian Gaetano; Catalan multiple system atrophy-registry (CMSAR) (Oxford University Press, 2017)

Recent evidence indicates a link between Parkinson's Disease (PD) and the expression of a-synuclein (SNCA) isoforms with different 3' untranslated regions (3'UTRs). Yet, the post-transcriptional mechanisms regulating SNCA ...
Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein

Zanzoni, Andreas; Marchese, Domenica, 1986-; Agostini, Federico, 1985-; Bolognesi, Benedetta; Cirillo, Davide; Botta-Orfila, Maria; Livi, Carmen Maria; Rodriguez-Mulero, Silvia; Tartaglia, Gian Gaetano (Oxford University Press, 2013)

Previous evidence indicates that a number of proteins are able to interact with cognate mRNAs. These autogenous associations represent important regulatory mechanisms that control gene expression at the translational level. ...
Protein aggregation, structural disorder and RNA-binding ability: a new approach for physico-chemical and gene ontology classification of multiple datasets

Klus, Petr, 1985-; Delli Ponti, Riccardo, 1987-; Livi, Carmen Maria; Tartaglia, Gian Gaetano (BioMed Central, 2015)

BACKGROUND: Comparison between multiple protein datasets requires the choice of an appropriate reference system and a number of variables to describe their differences. Here we introduce an innovative approach to discriminate ...